Ahmadpour SA, Farokhinejad R, Mehrabi-Koushki M. 2017. Further characterization and pathogenicity of Didymella microchlamydospora causing stem necrosis of Morus nigra in Iran. Mycosphere.8(7): 835-52. DOI:10.5943/mycosphere/8/7/3.
Ahmadpour SA, Mehrabi-Koushki M, Farokhinejad R, Asgari B. 2022. New species of the family Didymellaceae in Iran. Mycological Progress. 21(2): 28. DOI:10.1007/s11557-022-01800-5.
Ahmadpour SA, Mehrabi-Koushki M, Farrokhinejad R, Asgari B, Javadi A, … et al. 2021. New records of fungal species of the family Didymellaceae from Iran. Mycologia Iranica. 8(2): 119-33. DOI:10.22092/MI.2022.359850.1229.
Alidadi A, Kowsari M, Javan-Nikkhah M, Jouzani GS, Rastaghi ME. 2019. New pathogenic and endophytic fungal species associated with Persian oak in Iran. European Journal of Plant Pathology. 155(3): 1017-32. DOI:10.1007/s10658-019-01830-y.
Amirdehi E, Fotouhifar KB, Javan-Nikkhah M. 2017. Morphological and molecular study on some species of Phoma and related taxa in Iran. Rostaniha. 18(1): 59-76. DOI:10.22092/botany.2017.113235.
Artand S, Mehrabi-Koushki M, Tabein S, Hyde KD, Jayawardena RS. 2022. Revision of the Microsphaeropsis complex with addition of four new Paramicrosphaeropsis LW Hou, L. Cai & Crous species from Zagrosian forest trees in Iran. Cryptogamie, Mycologie. 43(7): 159-75. DOI:10.5252/cryptogamie-mycologie2022v43a7.
Artand S, Mehrabi-Koushki M, Tabein S. 2023. Identification of some fungal species in Chaetomiaceae and Didymellaceae families associated with foliar and trunk diseases symptoms on forest trees in the Zagrosian region. Journal of Applied Research in Plant Protection. 12(3): 239-256. DOI:10.22034/arpp.2023.16635.1611.
Aveskamp MM, de Gruyter J, Woudenberg JH, Verkley GJ, Crous PW. 2010. Highlights of the Didymellaceae: a polyphasic approach to characterise Phoma and related pleosporalean genera. Studies in mycology. 65(1): 1-60. DOI:10.3114/sim.2010.65.01.
Aveskamp MM, Verkley GJ, de Gruyter J, Murace MA, Perello A, … et al. 2009. DNA phylogeny reveals polyphyly of Phoma section Peyronellaea and multiple taxonomic novelties. Mycologia. 101(3): 363-82. DOI:10.3852/08-199.
Baćanović-Šišić J, Šišić A, Schmidt JH, Finckh MR. 2018. Identification and characterization of pathogens associated with root rot of winter peas grown under organic management in Germany. European Journal of Plant Pathology. 151(3): 745-755. DOI:10.1007/s10658-017-1409-0.
Bainard LD, Navarro-Borrell A, Hamel C, Braun K, Hanson K, … et al. 2017. Increasing the frequency of pulses in crop rotations reduces soil fungal diversity and increases the proportion of fungal pathotrophs in a semiarid agroecosystem. Agriculture, ecosystems & environment. 240: 206-214. DOI:10.1016/j.agee.2017.02.020.
Bashiri S, Abdollahzadeh J. 2024. Taxonomy and pathogenicity of fungi associated with oak decline in northern and central Zagros forests of Iran with emphasis on coelomycetous species. Frontiers in Plant Science. 15:1377441. DOI 10.3389/fpls.2024.1377441.
Boerema GH, de Gruyter J, Noordeloos ME. 2004. Phoma identification manual. Differentiation of specific and infra- specific taxa in culture. CABI Publishing, USA.
Boerema GH. 1993. Contributions towards a monograph of Phoma (Coelomycetes) II. Section peyronellaea. Persoonia-Molecular Phylogeny and Evolution of Fungi. 15(2): 197-221.
Chen Q, Hou LW, Duan WJ, Crous PW, Cai L. 2017. Didymellaceae revisited. Studies in mycology. 87(1): 105-59. DOI:10.1016/j.simyco.2017.06.002.
Chen Q, Jiang JR, Zhang GZ, Cai L, Crous PW. 2015. Resolving the Phoma enigma. Studies in mycology. 82: 137-217. DOI:10.1016/j.simyco.2015.10.003.
Crous PW, Gams W, Stalpers JA, Robert V, Stegehuis G. 2004. An online initiative to launch mycology into the 21st century. Studies in mycology. 50(1): 19-22.
Cui Y, Peng A, Song X, Cheng B, Ling J, … et al. 2021. First report of chick peach (Prunus persica L.) leaf spot disease caused by Didymella glomerata in China. Journal of Plant Pathology. 103(3): 1015. DOI:10.1007/s42161-021-00834-0.
Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9(8): 772. DOI:10.1038/nmeth.2109.
De Gruyter J, Aveskamp MM, Woudenberg JH, Verkley GJ, Groenewald JZ, … et al. 2009. Molecular phylogeny of Phoma and allied anamorph genera: towards a reclassification of the Phoma complex. Mycological research. 113(4): 508-519. DOI:10.1016/j.mycres.2009.01.002.
De Gruyter J, Boerema GH, van der Aa H. 2002. Contributions towards a monograph of Phoma (Coelomycetes) VI—2. Section Phyllostictoides: Outline of its taxa. Persoonia-Molecular Phylogeny and Evolution of Fungi. 18(1): 1-52.
Derviş S, Serçe ÇU, Dağdelen Altunbaş B, Ünlü N, Pamukçu G. 2024. Leaf blight caused by Didymella glomerata on blackberry in Turkey. New Zealand Journal of Crop and Horticultural Science. 52(1): 93-103. DOI:10.1080/01140671.2022.2138465.
Dong W, Hyde KD, Jeewon R, Karunarathna SC, Zhang H, … et al. 2025. Fungal diversity notes 2017–2122: taxonomic and phylogenetic contributions to freshwater fungi and other fungal taxa. Fungal Diversity.134(1): 185-459. DOI:10.1007/s13225-025-00560-3.
Dong W, Hyde KD, Jeewon R, Liao CF, Zhao HJ, … et al. 2023. Mycosphere notes 449–468: saprobic and endophytic fungi in China, Thailand, and Uzbekistan. Mycosphere. 14(1): 2208-2262. DOI:10.5943/mycosphere/14/1/26.
Edler D, Klein J, Antonelli A, Silvestro D. 2021. raxmlGUI 2.0: a graphical interface and toolkit for phylogenetic analyses using RAxML. Methods in ecology and evolution. 12(2): 373-377. DOI:10.1111/2041-210X.13512.
Esmaeili Taheri A, Chatterton S, Foroud NA, Gossen BD, McLaren DL. 2017. Identification and community dynamics of fungi associated with root, crown, and foot rot of field pea in western Canada. European Journal of Plant Pathology. 147(3): 489-500. DOI:10.1007/s10658-016-1017-4.
Farr DF, Rossman AY. 2026 Fungal Databases: U.S. National Fungus Collections, ARS, USDA. Internet Resource: https://nt.ars-grin.gov/fungaldatabases accessed 2 Feb 2026.
Havenga M, Gatsi GM, Halleen F, Spies CF, van der Merwe R, … et al. 2019. Canker and wood rot pathogens present in young apple trees and propagation material in the Western Cape of South Africa. Plant Disease. 103(12): 3129-3141. DOI:10.1094/PDIS-04-19-0867-RE.
Hou LW, Crous PW, Groenewald JZ, Cai L. 2020a. The phoma-like dilemma. Studies in Mycology, 95: 1–66. DOI:10.1016/j.simyco.2020.05.001.
Hou LW, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW. 2020b. Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys. 65: 49. DOI:10.3897/mycokeys.65.47704.
Huang SL, Wang L, Wang T, Jiao ZJ, Pang FH, … et al. 2018. First report of Didymella leaf blight on Cornus officinalis caused by Didymella glomerata in China. Plant Disease. 102(5): 1031. DOI:10.1094/PDIS-07-17-0933-PDN.
Hyde KD, Hongsanan S, Jeewon R, Bhat DJ, McKenzie EHC, … et al. 2016. Fungal diversity notes 367–490: taxonomic and phylogenetic contributions to fungal taxa. Fungal Diversity. 80: 1-270. DOI:10.1007/S13225-016-0373-X.
Ilyukhin E. 2022. First report of stem canker of Rosa spp. caused by Didymella pomorum in Canada. Journal of Plant Pathology. 104(1): 443. DOI:10.1007/s42161-021-01020-y.
Jayawardena RS, Purahong W, Zhang W, Wubet T, Li X, … et al. 2018. Biodiversity of fungi on Vitis vinifera L. revealed by traditional and high-resolution culture-independent approaches. Fungal Diversity. 90(1): 1-84. DOI:10.1007/s13225-018-0398-4.
Keshavarzi, F., Farrokhinejad, R., Mehrabi-Koushki, M. 2023. Identification of Didymellaceae fungi associated with different disease symptoms in some medicinal plants of Khuzestan Province, Iran. Iranian Journal of Plant Protection Science. 53(2): 163-176. DOI: 10.22059/ijpps.2022.341338.1007005.
Khodaei S, Arzanlou M, Babai-Ahari A, Rota-Stabelli O, Pertot I. 2018. Characterisation of several plant pathogenic species belonging to the family Didymellaceae based on multigene and morphological analyses in East and West Azarbaijan provinces. Iranian Journal of Plant Pathology. 54(2):87-110.
Liu J, Long Z, Xue L, Li C. 2023. First report of Didymella sinensis causing leaf blight on italian ryegrass in China. Plant Disease. 107(5): 1631. DOI: 10.1094/PDIS-08-22-1831-PDN.
Liu JK, Hyde KD, Jones EG, Ariyawansa HA, Bhat DJ, … et al. 2015. Fungal diversity notes 1–110: taxonomic and phylogenetic contributions to fungal species. Fungal diversity. 72(1): 1-97. DOI:10.1007/s13225-015-0324-y.
Liu YH, Zhang CQ, Dai DJ. 2019. First report of leaf black spot on White Chrysanthemum (Chrysanthemum morifolium) caused by Phoma bellidis in China. Plant Disease. 103(9): 2475. DOI:10.1094/PDIS-06-15-0723-PDN.
Luo X, Hu Y, Xia J, Zhang K, Ma L, … et al. 2024. Morphological and Phylogenetic Analyses Reveal Three New Species of Didymella (Didymellaceae, Pleosporales) from Jiangxi, China. Journal of Fungi. 10(1): 75. DOI:10.3390/jof10010075.
Lv R, Zheng L, Zhu Z, Pan L, Huang J, … et al. 2011. First report of stem blight of Eleocharis dulcis caused by Phoma bellidis in China. Plant Disease. 95(9): 1190. DOI:10.1094/PDIS-05-11-0438.
Ma W, Yang J, Ding J, Zhao W, Peng YL, … et al. 2022. Gapless reference genome assembly of Didymella glomerata, a new fungal pathogen of maize causing Didymella leaf blight. Frontiers in Plant Science. 13: 1022819. DOI:10.3389/fpls.2022.1022819.
Mehrabi-Koushki M, Khodadadi-Pourarpanahi S, Jounbozorgi S. 2018. Fungal endophytes associated with some thermotolerant plants in salt-stress ecosystem. Mikologiya i Fitopatologiya. 52(3): 187-95.
Mirabolfathy M, Hosseinian L, Peighami Ashnaei S. 2020. Fungal communities of grapevine decline in the main grape-growing regions of Iran. Indian Phytopathology. 74(3):809-815. https://doi.org/10.1007/s42360-020-00314-y.
Moral J, Lichtemberg PS, Papagelis A, Sherman J, Michailides TJ. 2018. Didymella glomerata causing leaf blight on pistachio. European Journal of Plant Pathology. 151(4): 1095-1099. DOI:10.1007/s10658-018-1422-y.
Nouri MT, Lawrence DP, Holland LA, Doll DA, Kallsen CE, Culumber CM, … et al. 2019. Identification and pathogenicity of fungal species associated with canker diseases of pistachio in California. Plant disease. 103(9): 2397-411. DOI:10.1094/PDIS-10-18-1717-RE.
O’Donnell K, Cigelnik E. 1997. Two Divergent Intragenomic rDNA ITS2 Types within a Monophyletic Lineage of the Fungus Fusarium are nonorthologous. Molecular Phylogenetics and Evolution 7: 103-116.
Pan H, Chen MY, Deng L, Wang ZP, Li L, … et al. 2018. First report of Didymella glomerata causing black spot disease of kiwifruit in China. Plant disease. 102(12): 2654. DOI:10.1094/PDIS-04-18-0583-PDN.
Pem D, Jeewon R, Selcuk F, Ulukapi M, Bhat J, … et al. 2020. Ribosomal and protein gene phylogeny reveals novel saprobic fungal species from Juglans regia and Urtica dioica. Frontiers in Microbiology. 11: 1303. DOI:10.3389/fmicb.2020.01303.
Persson L, Bødker L, Larsson-Wikström M. 1997. Prevalence and pathogenicity of foot and root rot pathogens of pea in southern Scandinavia. Plant disease. 81(2): 171-174. DOI:10.1094/PDIS.1997.81.2.171.
Pflughöft O, Merker C, von Tiedemann A, Schäfer BC. 2012. Zur verbreitung und bedeutung von pilzkrankheiten in körnerfuttererbsen (Pisum sativum L.) in Deutschland. Gesunde Pflanzen. 64(1): 39-48. DOI:10.1007/s10343-011-0270-x.
Ren Y, Li D, Zhao X, Wang Y, Bao X, … et al. 2019. Whole genome sequences of the tea leaf spot pathogen Didymella segeticola. Phytopathology. 109(10): 1676-1678. DOI:10.1094/PHYTO-02-19-0050-A.
Schmidt JH, Theisgen LV, Finckh MR, Šišić A. 2022. Increased resilience of peas toward root rot pathogens can be predicted by the nematode metabolic footprint. Frontiers in Sustainable Food Systems. 6: 881520. DOI:10.3389/fsufs.2022.881520.
Šišić A, Baćanović-Šišić J, Gamba FM, Finckh MR. 2024. Didymella pinodella: An important pea root rot pathogen in France to watch out for?. Journal of Fungi. 10(1): 44. DOI:10.3390/jof10010044.
Šišić A, Baćanović-Šišić J, Schmidt H, Finckh MR. 2019. Root pathogens occurring on pea (Pisum sativum) and faba bean (Vicia faba) in Germany. InScientific-Expert Conference of Agriculture and Food Industry. 69-75.
Šišić A, Baćanović-Šišić J, Schmidt H, Finckh MR. 2022. Farming system effects on root rot pathogen complex and yield of faba bean (Vicia faba) in Germany. Frontiers in Plant Science. 13: 1009906. DOI:10.3389/fpls.2022.1009906.
Soleimani P, Soleimani MJ, Hosseini S. 2018. Phylogenetic relationship and evolution of Neodidymelliopsis isolates collected from Iran. Mycosphere. 9(6): 1235-1255.
Song L, Jiang N, Tan G, Chen Q, Feng S, … et al. 2021. First report of round leaf spot on Sophora tonkinensis caused by Didymella glomerata in China. Plant Disease. 105(2): 498. DOI:10.1094/PDIS-06-20-1239-PDN.
Sutton BC. 1980. The coelomycetes. Fungi imperfecto with pycnidia, acervuli and stromata. Australasian Plant Pathology. 9(4): 120-121.
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular Biology and Evolution 30: 2725-2729. DOI:10.1093/molbev/mst197.
Tang T, Wang F, Guo J, Guo X, Duan Y, … et al. 2023. Leaf Spot Caused by Didymella glomerata on Chaihu (Bupleurum falcatum) in China. Plant Disease. 107(12): 4019. DOI:10.1094/PDIS-02-23-0272-PDN.
Tavakolian B, Mostowfizadeh‐Ghalamfarsa R, Crous PW. 2023. Paramicrosphaeropsis eriobotryae sp. nov., a new agent of loquat canker in Iran. Plant Pathology. 72(7): 1247-1259. DOI:10.1111/ppa.13746.
Thambugala KM, Daranagama DA, Phillips AJL, Bulgakov TS, Bhat DJ. 2016. Microfungi on Tamarix. Fungal Diversity. 82: 239-306. DOI:10.1007/s13225-016-0371-z.
Thambugala KM, Wanasinghe DN, Phillips AJ, Camporesi E, Bulgakov TS, … et al. 2017. Mycosphere notes 1–50: grass (Poaceae) inhabiting Dothideomycetes. Mycosphere. 8(4): 697-796. DOI:10.5943/mycosphere/8/4/13.
Tran HS, Li YP, You MP, Khan TN, Pritchard I, … et al. 2014. Temporal and spatial changes in the pea black spot disease complex in Western Australia. Plant Disease. 98(6): 790-796. DOI:10.1094/Pdis-08-13-0806-Re.
Tran HS, You MP, Khan TN, Barbetti MJ. 2016. Pea black spot disease complex on field pea: dissecting the roles of the different pathogens in causing epicotyl and root disease. European Journal of Plant Pathology. 144(3): 595-605. DOI:10.1007/s10658-015-0798-1.
Valenzuela-Lopez N, Cano-Lira JF, Guarro J, Sutton DA, Wiederhold N, … et al. 2018. Coelomycetous Dothideomycetes with emphasis on the families Cucurbitariaceae and Didymellaceae. Studies in mycology. 90(1): 1-69. DOI:10.1016/j.simyco.2017.11.003.
Wanasinghe DN, Jeewon R, Peršoh D, Jones EB, Camporesi E, … et al. 2018. Taxonomic circumscription and phylogenetics of novel didymellaceous taxa with brown muriform spores. Studies in Fungi. 3(1): 152-75. DOI:10.5943/sif/3/1/17.
Wang J, Liu J, Tang J, Li X, Dong X, … et al. 2024. First Report of Didymella pomorum Causing Leaf Blight on Angelica sinensis in China. Plant Disease. 108(10): 3194. DOI:10.1094/PDIS-06-24-1164-PDN.
Wang X, Wu X, Jiang S, Yin Q, Li D, … et al. 2021. Whole genome sequence and gene annotation resource for Didymella bellidis associated with tea leaf spot. Plant Disease. 105(4): 1168-70. DOI:10.1094/PDIS-05-20-0939-A.
Woudenberg JHC, Aveskamp MM, de Gruyter J, Spiers AG, Crous PW. 2009. Multiple Didymella teleomorphs are linked to the Phoma clematidina morphotype. Persoonia 22: 56-62. DOI:10.3767/003158509X427808.
Xu H, Cui J, Zhou R, Fu J, Hao N. 2016. First report of leaf spot disease in Angelica dahurica caused by Phoma bellidis in China. Journal of Phytopathology. 164(7–8): 448-454. DOI:10.1111/jph.12470.
Yan H, Mi Y, Li Y, Lv P, Chen Z, … et al. 2023. First Report of Didymella glomerata Causing Leaf Spot on Lonicera caerulea in Heilongjiang Province, China. Plant Disease. 107(10): 3308. DOI:10.1094/PDIS-08-22-1831-PDN.
Yang J, Chen C, Yin X, Xu H, Long H, … et al. 2023. Didymella Segeticola is a new pathogen causing leaf spot disease on Zanthoxylum bungeanum. New Zealand Journal of Crop and Horticultural Science. 51(4): 694-703. DOI:10.1080/01140671.2022.2080235.