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Analysis of genetic diversity of Trametes versicolor isolates collected from Northern provinces of Iran using ISSR marker | ||
| Mycologia Iranica | ||
| مقاله 4، دوره 10، شماره 2، اسفند 2023، صفحه 45-52 اصل مقاله (933.76 K) | ||
| نوع مقاله: Original Article | ||
| شناسه دیجیتال (DOI): 10.22092/MI.2023.362529.1262 | ||
| نویسندگان | ||
| Marzieh Sheikh Kalukhi1؛ Dariush Ramezan1؛ Abdolrahman Rahimian Boogar1؛ Mahdi Pirnia* 2؛ Mehdi Aran1 | ||
| 1Department of Horticulture and Landscape, Faculty of Agriculture, University of Zabol, Zabol, Iran | ||
| 2Department of Plant Protection, Faculty of Agriculture, University of Zabol, Zabol, Iran | ||
| چکیده | ||
| Due to the variety of vegetation and high humidity, the Northern provinces of Iran are the habitat of many medicinal mushrooms. Genetic variation of medicinal mushrooms in Iran is poorly studied. 30 isolates of Trametes versicolor were collected from different localities in Guilan, Golestan, and Mazandaran provinces (North of Iran). The genetic diversity was evaluated by ISSR marker. 86 bands were observed using eight polymorphic primers. Cluster analysis showed that the isolates divided into 18 groups at a level of 0.22 similarity coefficient. SI indices were 0.335, 0.305 and 0.217 in Guilan, Golestan, and Mazandaran populations respectively. 96% genetic variation was observed within populations. The diverse geographic origin of the isolates is an influential factor in the high intra-population genetic diversity of the fungus. | ||
| کلیدواژهها | ||
| DNA fingerprinting؛ genetics؛ medicinal mushrooms؛ molecular variance | ||
| مراجع | ||
|
Bogacki, P., Keiper, F.J. and Oldach, K.H. 2010. Genetic structure of south Australian Pyrenophora teres populations as revealed by microsatellite analyses. Fungal Biology 114: 834-841.
Burdon, J.J. and Laine, A.L. 2019. Evolutionary dynamics of plant-pathogen interactions. Cambridge University Press. https://doi.org/10.1017/9781108625517.005.
Carlson, A.L., Justo, A. and Hibbett, D.S. 2014. Species delimitation in Trametes: A comparison of ITS, RPB1, RPB2, TEF1 gene phylogenies. Mycologia 106: 735-745.
Cui, D.Z., Zhao, M., Yang, H.Y., Wang, C.I. and Dai, H.B. 2011. Molecular phylogeny of Trametes and related genera based on internal transcribed spacer (ITS) and nearly complete mitochondrial small subunit ribosomal DNA (mt SSU rDNA) sequences. African Journal of Biotechnology 10(79): 18111-18121.
Du, P., Cui, B.K. and Dai, Y.C. 2011. High genetic diversity in wild culinary medicinal wood ear mushroom, Auricularia polytricha (Mont.) Sacc., in tropical China revealed by ISSR analysis. International Journal of Medicinal Mushrooms 13: 289-297.
Ershad, D. 2022. Fungi and fungal analogues of Iran. Iranian Research Institute of Plant Protection, Tehran, Iran.
Hibbett, D.S. and Donoghue, M.J. 1995. Progress toward a phylogenetic classification of the Polyporaceae through parsimony analyses of ribosomal DNA sequences. Canadian Journal of Botany 73 (suppl 1): S853–S861.
Kamiyama, M., Horiuchi, M., Umano, K., Kondo, K., Otsuka, Y. and Shibamoto, T. 2013. Antioxidant/anti-inflammatory activities and chemical composition of extracts from the mushroom Trametes versicolor. International Journal of Nutrition and Food Sciences 2(2): 85-91.
Kauserud, H. and Schumacher, T. 2003. Genetic structure of Fennoscandian populations of the threatened wood-decay fungus Fomitopsis rosea (Basidiomycota). Mycological Research 2: 155-163.
Khanuja, S.P.S., Shasany, A.K., Darokar, M.P. and Kumar, S. 1999. Rapid isolation of DNA from dry and fresh samples of plants producing large amounts of secondary metabolites and essential oils. Plant Molecular Biology Reports 17: 1-7.
Ko, K.S. and Jung, H.S. 1999. Molecular phylogeny of Trametes and related genera. Antonie van Leeuwenhoek. 75: 191-199.
Kotlaba, F. and Pouzar, Z. 1957. On the classification of European pore fungi. Ceska Mycology 11: 152–170.
Malekzadeh, K., Shahri, B. and Mohsenifard, E. 2011. Use of ISSR markers for strain identification in the button mushroom, Agaricus bisporus. Proceedings of the 7th international conference on mushroom biology and mushroom products France, p. 30-34.
MycoBank: an online database documenting mycological nomenclatural novelties https://www.mycobank.org/search/basic names search/.
Nobles, M.K. 1958. Cultural characters as a guide to the taxonomy and phylogeny of the Polyporaceae. Canadian Journal of Botany 36: 883–926.
Olou, B.A., Krah, F.S., Piepenbring, M., Yorou, N.S. and Langer, E. 2020. Diversity of Trametes (Polyporales, Basidiomycota) in tropical Benin and description of new species Trametes parvispora. MycoKeys 65: 25-47.
Olusegun, O.V. 2014. Molecular identification of Trametes species collected from Ondo and Oyo States, Nigeria. Jordan Journal of Biological Sciences 147: 1-5.
Tomšovský, M. 2008. Molecular phylogeny and taxonomic position of Trametes cervina and description of a new genus Trametopsis. Czech Mycology 60: 1–11.
Tomšovsky, M., Kolařík, M., Pažoutová, S. and Homolka, L. 2006. Molecular phylogeny of European Trametes (Basidiomycetes, Polyporales) species based on LSU and ITS (nrDNA) sequences. Nova Hedwigia 82: 269-280.
Ueitele, I.S.E., Chimwamurombe, P.M. and Kadhila, N.P. 2018. Molecular Phylogeny of Trametes and Related Genera from Northern Namibia. Jordan Journal of Biological Sciences 11: 99-105.
Wang, S., Miao, X., Zhao, W., Huang, B., Fan, M., LI, Z. and Huang, Y. 2005. Genetic diversity and population structure among strains of the entomopathogenic fungus, Beauveria bassiana, as revealed by inter-simple sequence repeat (ISSR). Mycological Research 109: 1364-1372.
Welti, S., Moreau, P.A., Favel, A., Courtecuisse, R., Haon, M., Navarro, D., Taussac, S. and Lesage-Meessen, L. 2012. Molecular phylogeny of Trametes and related genera, and description of a new genus Leiotrametes. Fungal Diversity 55(1): 47-64.
Yang, X.L., Li, G.J., Li, S.F. and Wen, H.A. 2010. Genetic diversity of Trametes versicolor revealed by inter-simple sequence repeat markers. Mycosystema 29(6): 886-892.
Zmitrovich, I.V, Oleg, N.E. and Solomon, P.W. 2012. A Survey of species of genus Trametes Fr. (Higher Basidiomycetes) with an estimation of their medicinal source potential. International Journal of Medicinal Mushrooms 14(3): 307–319 | ||
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