| تعداد نشریات | 284 |
| تعداد نشریات سازمان | 82 |
| تعداد شماره‌ها | 3,037 |
| تعداد مقالات | 33,984 |
| تعداد مشاهده مقاله | 45,770,111 |
| تعداد دریافت فایل اصل مقاله | 77,190,438 |
New species of family Saprolegniaceae in Mazandaran, Iran | ||
| Mycologia Iranica | ||
| دوره 8، شماره 2، اسفند 2021، صفحه 67-76 اصل مقاله (1.12 M) | ||
| نوع مقاله: Original Article | ||
| شناسه دیجیتال (DOI): 10.22092/MI.2022.358524.1216 | ||
| نویسندگان | ||
| Bagher Roohvarzi1؛ Mohammad Ali Tajik* 2؛ Safarali Mahdian3؛ Youbert Ghosta4 | ||
| 1Faculty of Agronomic Sciences, Department of Plant Protection, Sari Agricultural Sciences and Natural Resources University,Sari , Iran. | ||
| 2Department of Plant Protection, Faculty of Agronomic Sciences, Sari Agricultural Sciences and Natural Resources University,Sari , Iran | ||
| 3Department of Plant Protection, Faculty of Agronomic Sciences, Sari Agricultural Sciences and Natural Resources University, Sari , Iran | ||
| 4Associate Professor of Mycology,Department of Plant Protection, Faculty of Agriculture and Natural Resources, Urmia University, Urmia, Iran | ||
| چکیده | ||
| Oomycete species occupy many different environments and many ecological niches. The family Saprolegniaceae from Oomycota includes widely distributed water molds which usually behave as saprophytes on plants and animal debris. Members of some species may also be pathogenic for plants and fish. Oomycete species identification based on DNA is well established, but DNA barcoding with cytochrome c oxidase subunit I (COXI) and II (COX II) are a relatively new approach. In this study, 57 isolates were obtained from water samples in mazandaran province, Iran. After morphological identification by morphological keys, ITS, COXI , and COX II gene regions of 10 representatives of the isolates were sequenced and 3 genera and 6 species (Newbya recurva, Achlya bisexualis, Dictyuchus monosporus, Saprolegnia ferax, S. bulbosa , and S. debaryana) were identified through BLASTn in NCBI gene bank. The results described in this paper were indicated that except for ITS, COXI and COXII sequencing could also be valuable resources to Saprolegniaceae identification. Except for S. ferax, other described species were new reports for oomycete biota of Iran. | ||
| کلیدواژه‌ها | ||
| Oomycota؛ water molds؛ cytochrome c oxidase؛ plant pathogens؛ ITSrDNA؛ Saprolegniace | ||
| مراجع | ||
|
Alexopoulos CJ, Mims, CW, Blackwell M. 1996. Introductory mycology. John Wiley and Sons. 880 p.
Beakes G, Ford H. 1983. Esterase isoenzyme variation in the genus Saprolegnia, with particular reference to the fish-pathogenic S. diclina-parasitica complex. Journal of General Microbiology 129: 2605-2619.
Bolboli Z, Mostowfizadeh-Ghalamfarsa R. 2019. Isolation and identification of aquatic saprolegnious stramenopiles in Fars and Kermanshah provinces (west of Iran). Rostaniha 20(1): 14-28.
Dick MW. 1969. Morphology and taxonomy of the Oomycetes, with special reference to Saprolegniaceae, Leptomitaceae and Pythiaceae. New Phytologist 68: 751-775.
Dick MW. 1990. Phylum Oomycota. In: Handbook of Protoctista. (L Margulis, JO Corliss, M Melkonian & JD Chapman, eds): 661–685. Jones and Bartlett, Boston.
Dick MW. 1999. Classification of the Peronosporomycetes. In: Encyclopaedia of Food Microbiology. Vol. 2. (R Robinson, UC Ba & P Patel, eds): 871-88. Academic Press, London.
Diéguez-Uribeondo J, Fregeneda-Grandes JM, Cerenius L, Pérez-Iniesta E, Aller-Gancedo JM, Tellería MT, Söderhäll K, Martín MP. 2007. Re-evaluation of the enigmatic species complex Saprolegnia diclina–Saprolegnia parasitica based on morphological, physiological, and molecular data. Fungal Genetics and Biology 44: 585-601.
Emerson R, Natvig DO. 1981. Adaptation of fungi to stagnant waters. In: The Fungal Community, Its Organization and Role in the Ecosystem. (DT Wicklow & GC Carroll, eds.): 109-128. Marcel Dekker Inc., New York.
Green BR, Dick MW. 1972. DNA base composition and the taxonomy of the Oomycetes. Can J Microbiol. 18: 963-968.
Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. In Nucleic acids symposium series 41: 95-98. [London]: Information Retrieval Ltd., c1979-c2000.
Hatamian SM. 2009. Isolation and identification of water molds from center region of Mazandaran province. MSc thesis, Islamic Azad University of Damghan, Iran.
Hudspeth DS, Nadler SA, Hudspeth ME. 2000. A COX II molecular phylogeny of the Peronosporomycetes. Mycologia 92: 674-684.
Johnson TW. 1956. The genus Achlya: morphology and taxonomy. Univ. Michigan Press, Ann Arbor, 180 pp, London.
Johnson TW, Seymour RL, Padgett DE. 2002. Biology and systematics of the Saprolegniaceae [online]. North Carolina, Wilmington. Available frome: http://dl.uncwil.edu/biology/fungi/taxonomy%20and%20systematics/padgett/read%5Ffirst/
Khulbe RD. 2001. A Manual of Aquatic Fungi: Chytridiomycetes & Oomycetes. Daya Books, 255 pp, India.
Kumar S, Stecher G, Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution 33: 1870-1874.Hatai K, Willoughby L, Beakes G. 1990. Some characteristics of Saprolegnia obtained from fish hatcheries in Japan. Mycological research 94: 182-190.
Leclerc M, Guillot J, Deville M. 2000. Taxonomic and phylogenetic analysis of Saprolegniaceae (Oomycetes) inferred from LSU rDNA and ITS sequence comparisons. Antonie van Leeuwenhoek 77: 369-377.
Markovskaja S. 2006. SAPROLEGNIACEAE (PERONOSPOROMYCETES) IN LITHUANIA. II. THE GENUS SAPROLEGNIA. Botanica Lithuanica 12(2): 97-112.
Markovskaja S. 2007. Contribution to the Lithuanian water moulds. New reports of critical Achlya (Saprolegniaceae, Peronosporomycetes) species. Botanica Lithuanica 13(1): 39–44.
Masigol H, Khodaparast SA, Mostowfizadeh-Ghalamfarsa R, Mousanejad S, Rojas-Jimenez K, Grossart HP. 2018. Notes on Dictyuchus species (Stramenopila, Oomycetes) from Anzali lagoon, Iran. Mycologia Iranica. Dec 1;5(2):79-89.
Masigol H, Khodaparast S A, Mostowfizadeh-Ghalamfarsa R, Rojas-Jimenez K, Woodhouse J N, Neubauer D and Grossart H P. 2020. Taxonomical and functional diversity of Saprolegniales in Anzali lagoon, Iran. Aquatic Ecology 54(1): 323-336.
Molina FI, Jong SC, Ma G. 1995. Molecular characterization and identification of Saprolegnia by restriction analysis of genes coding for ribosomal RNA. Antonie van Leeuwenhoek 68: 65-74.
Mousavi H, Soltani M, Khosravi A, Mood S, Hosseinifard M. 2009. Isolation and characterization of Saprolegniaceae from rainbow trout (Oncorhynchus mykiss) eggs in Iran. Journal of Fisheries and Aquatic Science 4: 330-333.
Nejadsattari T. 2000. Occurrence and distribution of aquatic Saprolegniaceae in the northwest and south of Tehran. Iranian International Journal of Science 2: 91-98.
Nekuie Fard A, Motalebi A, Jalali Jafari B, Aghazadeh Meshgi M, Azadikhah D, Afsharnasab M. 2011. Survey on fungal, parasites, and epibionts infestation on the Astacus leptodactylus (Eschscholtz, 1823), in Aras Reservoir West Azarbaijan, Iran. Iranian Journal of Fisheries Sciences 10: 266-275.
Petrisko JE, Pearl CA, Pilliod DS, Sheridan PP, Williams CF, Peterson CR, Bury RB. 2008. Saprolegniaceae identified on amphibian eggs throughout the Pacific Northwest, USA, by internal transcribed spacer sequences and phylogenetic analysis. Mycologia 100: 171-180.
Riethmüller A, Weiss M, Oberwinkler F. 1999. Phylogenetic studies of Saprolegniomycetidae and related groups based on nuclear large subunit ribosomal DNA sequences. Can. J. Bot 77: 1790-1800.
Robideau GP, De C, Wam A, Coffey MD, Voglmayr H, Brouwer H, Bala K, Chitty DW, Desaulniers N, Eggertson QA. 2011. DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Molecular ecology resources 11:
1002-1011.
Seymour RL. 1970. The genus Saprolegnia. Nova Hedwigia 19: 1-124.
Shahbazian N, Ebrahimzadeh HA, Mousavi H, Soltani M, Khosravi A, Mirzargar S, Sharifpour I. 2010. Fungal contamination in rainbow trout eggs in Kermanshah province propagations with emphasis on Saprolegniaceae. Iranian Journal of Fisheries Sciences 9: 151-160.
Steciow MM, Paul A, Bala K. 2007. Saprolegnia bulbosa sp. nov. isolated from an Argentine stream: taxonomy and comparison with related species. FEMS microbiology letters 268(2):225-30.
Tajick-Ghanbary M.A, Safdari M, Sharifi R, Abbasi V. 2008. A new Saprolegnia species for mycoflora of Iran. Proceedings of the 18th Iranian Plant Protection Congress, vol. II, 22–27 Aug., Hamedan, Iran: 424.
White TJ, Bruns TD, Lee SB, Taylor JW 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sininsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp 315–322
Willoughby L. 1978. Saprolegnias of salmonid fish in Windermere: a critical analysis. Journal of Fish Diseases 1: 51-67. | ||
|
آمار تعداد مشاهده مقاله: 244 تعداد دریافت فایل اصل مقاله: 410 |
||