| تعداد نشریات | 285 |
| تعداد نشریات سازمان | 83 |
| تعداد شماره‌ها | 3,086 |
| تعداد مقالات | 34,442 |
| تعداد مشاهده مقاله | 48,907,050 |
| تعداد دریافت فایل اصل مقاله | 79,347,554 |
Multigene phylogeny and morphotaxonony of Septoria spp. from Iran along with a checklist of septoria-like taxa | ||
| Rostaniha | ||
| مقاله 2، دوره 18، شماره 2 - شماره پیاپی 54، اسفند 2017، صفحه 122-141 اصل مقاله (574.79 K) | ||
| نوع مقاله: Research Paper | ||
| شناسه دیجیتال (DOI): 10.22092/botany.2018.115940 | ||
| نویسندگان | ||
| Mounes Bakhshi* 1؛ Mahdi Arzanlou2 | ||
| 1Department of Botany, Iranian Research Institute of Plant Protection, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran | ||
| 2Prof., Department of Plant Protection, Faculty of Agriculture, University of Tabriz, Tabriz, Iran | ||
| چکیده | ||
| The genus Septoria includes important plant pathogens with worldwide distribution, commonly associated with leaf spots and stem cankers of a broad range of plant hosts. In this study, eight isolates of Septoria were recovered from leaves with leaf spot on four herbaceous and woody plants from Gilan, Ardebil, East and West Azerbaijan provinces in north and northwest of Iran. The isolates were studied by applying a polyphasic approach including morphological and cultural data, and multi-gene phylogeny (LSU, ITS, ACT, TEF1-α, CAL, TUB, and RPB2). They were then identified as Septoria convolvuli on Sonchus sp., S. protearum on Solanum pseudocapsicum, S. polygonorum on Punica granatum,and S. urticae on Urtica dioica. Septoria protearum represents a new record for the mycobiota of Iran. Moreover, this research reports Sonchus sp. as new host of S. convolvuli, Punica granatum as new host of S. polygonorum, and Solanum pseudocapsicum as new host of S. protearum worldwide. Additionally, a comprehensive literature-based checklist for 102 septoria-like species known to occur on different plant species in Iran was also provided. The complete annotated list covers 78 Septoria species, eight Stagonospora, seven Sphaerulina, four Zymoseptoria, two Phloeospora, one Caryophylloseptoria, one Parastagonospora, and one Stromatoseptoria. | ||
| کلیدواژه‌ها | ||
| Leaf spot؛ Mycosphaerella؛ phylogeny؛ plant pathogens؛ Systematic | ||
| عنوان مقاله [English] | ||
| فیلوژنی چندژنی و ریخت‌شناسی گونه‌های جنس سپتوریا از ایران به همراه فهرستی از آرایه‌های شبه‌سپتوریا | ||
| نویسندگان [English] | ||
| مونس بخشی1؛ مهدی ارزنلو2 | ||
| 1استادیار پژوهش بخش تحقیقات رستنی‌ها، مؤسسه تحقیقات گیاه‌پزشکی کشور، سازمان تحقیقات، آموزش و ترویج کشاورزی، تهران، ایران | ||
| 2استاد گروه گیاه‌پزشکی، دانشکده کشاورزی، دانشگاه تبریز، تبریز، ایران | ||
| چکیده [English] | ||
| جنس سپتوریا بیمارگرهای گیاهی مهمی را شامل می‌شود که در سراسر جهان پراکنده‌اند و اغلب با لکه‌برگی و شانکر ساقه در دامنه گسترده‌ای از میزبان‌های گیاهی همراه هستند. در این پژوهش، هشت جدایه از این جنس از برگ‌های دارای علایم لکه‌برگی میزبان‌های چوبی و علفی از استان‌های اردبیل، گیلان، آذربایجان شرقی و آذربایجان غربی به دست آمد. این جدایه‌ها با استفاده از راهکار چندمنظری براساس ترکیب داده‌های توالی هفت ناحیه ژنی (LSU، ITS، ACT، TEF1-α، CAL، TUB و RPB2)، داده‌های میزبان و صفات ریخت‌شناختی مورد بررسی قرار گرفتند. چهار گونه شامل Septoria convolvuli، S. protearum، S. polygonorum و S. urticae شناسایی شدند. این نخستین گزارش از وجود آرایه S. protearum برای میکوبیوتای ایران می‌باشد. همچنین، گیاه Sonchus sp. به عنوان میزبان جدیدی برای گونه S. convolvuli، انار (Punica granatum)، میزبان جدیدی برای گونه S. polygonorum و گیلاس مجلسی (Solanum pseudocapsicum) به عنوان میزبان جدیدی برای گونهS. protearum در سطح جهان معرفی می‌شوند. علاوه بر این، در این پژوهش، فهرست کاملی از 102 گونه سپتوریا و وابستگان آن که روی میزبان‌های مختلف در ایران گزارش شده‌اند، ارایه گردیده است. فهرست حاضر، دربردارنده 78 گونه Septoria، هشت گونه Stagonospora، هفت گونه Sphaerulina، چهار گونه Zymoseptoria، دو گونه Phloeospora، یک گونه Caryophylloseptoria یک گونه Parastagonospora و یک گونه Stromatoseptoria می‌باشد. | ||
| کلیدواژه‌ها [English] | ||
| بیمارگر گیاهی, سیستماتیک, فیلوژنی, لکه‌برگی, میکوسفرلا | ||
| مراجع | ||
|
Aghajani, M.A., Aghapour, D.B. & Michailides, T.J. 2009. First report of Septoria leaf spot of pistachio in Iran. Australasian Plant Disease Notes 4(1): 29–31. Amani, M. & Avagyan, G. 2014. First report of banana Septoria leaf spot disease caused by Septoria eumusae in Iran. International Journal of Farming and Allied Sciences 3: 1140–1144.
Aptroot, A. 2006. Mycosphaerella and its anamorphs. 2, Conspectus of Mycosphaerella. CBS Biodiversity Series 5. CBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands.
Ashkan, S.M., Zare, R. & Javadi, A.R. 2011. A study on three fungal diseases of mulberry shoot in Izadshahr (Mazandaran) and Astaneh (Gilan), Iran. Iranian Journal of Plant Pathology 47(3): 103–104. Azimi, A., Abbasi, M., Osipyan, L.L. & Javadi-Estahbanati, A.R. 2011. Introducing some new species of Septoria for the Iranian mycobiota. Iranian Journal of Plant Pathology 47(4): 121–122. Bakhshi, M., Arzanlou, M. & Babai-ahari, A. 2011. Uneven distribution of mating type alleles in Iranian populations of Cercospora beticola, the causal agent of Cercospora leaf spot disease of sugar beet. Phytopathologia Mediterranea 50(1): 101–109.
Bakhshi, M., Arzanlou, M., Babai-ahari, A., Groenewald, J.Z. & Crous, P.W. 2014.Multi-gene analysis of Pseudocercospora spp. from Iran. Phytotaxa 184(5): 245–264.
Bakhshi, M., Arzanlou, M., Babai-ahari, A., Groenewald, J.Z., Braun, U. & Crous, P.W. 2015. Application of the consolidated species concept to Cercospora spp. from Iran. Persoonia 34: 65–86.
Constantinescu, O. 1984. Taxonomic revision of Septoria-like fungi parasitic on Betulaceae. Transactions of the British Mycological Society 83(3): 383–398. Crous, P.W., Summerell, B.A., Carnegie, A.J. Wingfield, M.J. Hunter, G.C., Burgess, T.I., Andjic, V., Barber, P.A. & Groenewald, J.Z. 2009a. Unravelling Mycosphaerella: do you believe in genera? Persoonia 23: 99–118.
Crous, P.W., Verkley, G.J.M., Groenewald, J.Z. & Samson, R.A. 2009b. Fungal Biodiversity. CBS Laboratory Manual Series 1: 1–269. Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands.
Crous, P.W., Kang, J.C. & Braun, U. 2001. A phylogenetic redefinition of anamorph genera in Mycosphaerella based on ITS rDNA sequence and morphology. Mycologia 93: 1081–1101.
Crous, P.W., Denman, S., Taylor, J.E., Swart, L. & Palm, M.E. 2004. Cultivation and diseases of Proteaceae: Leucadendron, Leucospermum and Protea. CBS Biodiversity Series 2: 1–228.
Crous, P.W., Braun, U., Hunter, G.C. Wingfield, M.J., Verkley, G.J.M., Shin, H.D., Nakashima, C. & Groenewald, J.Z.2013a. Phylogenetic lineages in Pseudocercospora. Studies in Mycology 75: 37–114.
Crous, P.W., Quaedvlieg, W., Sarpkaya, K., Can, C. & Erkilic, A. 2013b. Septoria-like pathogens causing leaf and fruit spot of pistachio. IMA Fungus 4(2): 187–199.
Ershad, D. 2009. Fungi of Iran. 3rd ed. Agricultural Research. Education & Extension Organization, Publication. No. 10, Tehran, 531 pp.
Farr, D.F. 1992. Species of Septoria on the Fabaceae, subfamily Faboidae, tribe Genistae. Sydowia 44: 13–31. Farr, D.F. & Rossman, A.Y. 2017. Fungal Databases, Systematic Mycology and Microbiology Laboratory, ARS, USDA. Available from https://nt.ars-grin.gov/fungaldatabases.
Feau, N., Weiland, J.E., Stanosz, G.R. & Bernier, L. 2005. Specific and sensitive PCR-based detection of Septoria musiva, S. populicola and S. populi, the causes of leaf spot and stem canker Golmohammadi, R., Babai-Ahari, A., Arzanlou, M. & Khodaei, S. 2015. Morphological and molecular identification and pathogenicity of Septoria species involved in leaf spot disease on Populus species in East Azerbaijan, West Azerbaijan and Ardebil provinces. Iranian Journal of Plant Pathology 51(3): 357–365. Groenewald, J.Z., Nakashima, C., Nishikawa, J., Shin, H-D, Park, J.H., Jama, A.N., Groenewald, M., Braun, U. & Crous, P.W.2013. Species concepts in Cercospora: spotting the weeds among the roses. Studies in Mycology 75: 115–170.
Hawksworth, D.L. 2011. A new dawn for the naming of fungi: impacts of decisions made in Melbourne in July 2011 on the future publication and regulation of fungal names. IMI Fungus 2(2): 155–162.
Jamali, S. 2015. First report of Septoria silybi associated with leaf blotch of Silybum marianum from Iran. Plant Science Today 2(1): 21–23. Jørstad, I. 1965. Septoria and septoroid fungi on dicotyledones in Norway. Skrifter utgitt av Det Norske Videnskaps-Akademi i Oslo, I: Matematisk-Naturvidenskapelig Klasse 22: 1–110.
Katoh, K. & Standley, D.M. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30(4): 772–780.
Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., Duran, C. & Thierer, T. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28(12): 1647–1649.
Kirk, P.M., Stalpers, J.A., Braun, U., Crous, P.W., Hensen, K., Hawksworth, D.L., Hyde, K.D., Lücking, R., Lumbsch, T.H., Rossman, A.Y. & Seifert, K.A. 2013. A without-prejudice list of generic names of fungi for protection under the International Code of Nomenclature for Algae, Fungi, and Plants. IMA Fungus 4(2): 381–443.
Maddison, W.P. & Maddison, D.R. 2011. Mesquite: a modular system for evolutionary analysis. Version 2.75. http://mesquiteproject.org.
Mathieu, D. & Kushalappa, A.C. 1993. Effects of temperature and leaf wetness duration on the infection of celery by Septoria apiicola. Phytopathology 83(10): 1036–1040. McDonald, B.A. & Martinez, J.P. 1990. DNA restriction fragment length polymorphisms among Mycosphaerella graminicola (anamorph Septoria tritici) isolates collected from a single wheat field. Phytopathology 80(12): 1368–1373. Möller, E.M., Bahnweg, G., Sandermann, H. & Geiger, H. 1992. A simple and efficient protocol for isolation of high molecular weight DNA from filamentous fungi, fruit bodies, and infected plant tissues. Nucleic Acids Research 20 (22): 6115–6116.
Norvel, L.L. 2011. Fungal nomenclature. 1. Melbourne approves a new Code. Mycotaxon 116(1): 481–490.
Nylander, J.A.A. 2004. MrModeltest v 2.0. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
Priest, M.J. 2006. Fungi of Australia: Septoria. ABRS, Canberra: CSIRO publishing, Melbourne, Australia. Quaedvlieg, W., Kema, G.H.J., Groenewald, J.Z., Verkley, G.J.M., Seifbarghi, S., Razavi, M., Mirzadi-Gohari, A., Mehrabi, R. & Crous, P.W. 2011. Zymoseptoria gen. nov.: a new genus to accommodate Septoria-like species occurring on graminicolous hosts. Persoonia 26: 57–69. Quaedvlieg, W., Verkley, G.J.M., Shin, H-D., Barreto, R.W., Algenas, A.C., Swart, W.J., Groenewald, J.Z. & Crous, P.W. 2013. Sizing up Septoria. Studies in Mycology 75: 307–390. Quaedvlieg, W., Binder, M., Groenewald, J.Z., Summerell, B.A., Carnegie, A.J., Burgess, T.I. & Crous, P.W.2014. Introducing the consolidated species concept to resolve species in the Teratosphaeriaceae. Persoonia 33: 1–40.
Rayner, R.W. 1970. A mycological color chart. CMI and British Mycological Society, Kew, Surrey, England.
Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61(3): 539–542.
Seifbarghi, S., Razavi, M., Abbasi, M. & Zare, R. 2010. First report of leaf blotch caused by Septoria phalaridis on Phalaris paradoxa. Plant Disease 94(3): 375.
Sutton, B.C. 1980. The Coelomycetes. Fungi imperfecti with pycnidia, acervuli and stromata. Commonwealth Mycological Institute, Kew, Surrey, England. Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. 2013. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Molecular Biology and Evolution 30(12): 2725–2729. Verkley, G.J.M. & Priest, M.J. 2000. Septoria and similar coelomycetous anamorphs of Mycosphaerella. Studies in Mycology 45: 123–128.
Verkley, G.J.M., Starik-willemse, M., van Iperen, A. & Abeln, E.C.A. 2004. Phylogenetic analyses of Septoria species based on the ITS and LSU-D2 regions of nuclear ribosomal DNA. Mycologia 96(3): 558–571.
Verkley, G.J.M., Quaedvlieg, W., Shin, H-D. & Crous, P.W. 2013. A new approach to species delimitation in Septoria. Studies in Mycology 75: 213–305. Videira, S.I.R., Groenewald, J.Z., Kolecka, A., van Haren, L., Boekhout, T. & Crous, P.W. 2015. Elucidating the Ramularia eucalypti species complex. Persoonia 34: 50–64.
Videira, S.I.R., Groenewald, J.Z., Braun, U., Shin, H-D & Crous, P.W. 2016. All that glitters is not Ramularia. Studies in Mycology 83: 49–163.
Wingfield, M.J., de Beer, Z.W., Slippers, B., Wingfield, B.D., Groenewald, J.Z., Lombard, L. & Crous, P.W. 2012. One fungus, one name promotes progressive plant pathology. Molecular Plant Pathology 13(6): 604–613.
Zafari, D. & Razaghi, P. 2013. Septoria sonchi causes Sonchus oleraceus leaf spot in Iran. Australasian Plant Disease Notes 8(1): 55–57. Zahedi, M., Elahinia, S., Khodaparast, S.A. & Bujari, J. 2011. Introduction of some new mitosporic fungi causing leaf spot on broad leaf trees in Gilan province (N Iran). Rostaniha 12(1): 63–71.
| ||
|
آمار تعداد مشاهده مقاله: 994 تعداد دریافت فایل اصل مقاله: 932 |
||